Life as we don't know it ... on Earth?

NASA's secret is finally out: Researchers say they've forced microbes from a gnarly California lake to become arsenic-gobbling aliens. It may not be as thrilling as discovering life on Titan, but the claim is so radical that some chemists aren't yet ready to believe it.

If the claim holds up, it would lend weight to the idea that life as we know it isn't the only way life could develop. Organisms with truly alien biochemistry could conceivably arise on a faraway exoplanet, or on the Saturnian moon Titan, or even here on Earth.

"Our findings are a reminder that life as we know it could be much more flexible than we generally assume or can imagine," Felisa Wolfe-Simon, an astrobiology researcher at the U.S. Geological Survey, said in a statement from Arizona State University announcing the results. Wolfe-Simon is the lead author of a paper reporting the findings, which was published online today by the journal Science.


Four years ago, while studying at ASU, Wolfe-Simon proposed that some organisms in extreme environments might be adapted to use arsenic in place of phosphorus. Phosphorus is one of the elements essential to life's chemistry -- in addition to carbon, hydrogen, nitrogen, oxygen and sulfur. Arsenic, which is just below phosphorus on the periodic table, is poisonous precisely because it can take phosphorus' place in biomolecules.

"It gets in there and sort of gums up the works of our biochemical machinery," ASU's Ariel Anbar, a co-author of the Science paper, explained.

In search of arsenophiles
Wolfe-Simon theorized that some organisms could have evolved in ancient times to make use of arsenic-based compounds known as arsenates, in place of the phosphates used by virtually all the organisms we know today. Such arsenophiles might even persist in environments with elevated levels of arsenic -- environments such as the hydrothermal vents at the bottom of the ocean, or Mono Lake in California.

Mono Lake?  

It turns out that that eerie-looking tourist destination, 13 miles east of Yosemite National Park, contains arsenic as well as the usual phosphorus. Wolfe-Simon and her colleagues designed an experiment to take a particular type of salt-loving bacteria called GFAJ-1 from Mono Lake's mud sediments, wean it off phosphorus, and see if it could switch its diet to arsenic.

David Mcnew / Getty Images file

Limestone formations rise from California's salty, arsenic-laden Mono Lake. Researchers say they coaxed bacteria taken from the lake to use arsenic in place of phosphorus - and suggest that alien life forms could use a similar arsenic-based biochemistry.

In the paper published today, the researchers report that some of the bacteria could survive on arsenic and incorporate it into their cellular biochemistry. Instead of the usual phosphate-rich DNA, they observed arsenate-rich DNA. Heightened levels of arsenic also showed up in the cell's proteins and fats. The scientists used mass spectroscopy, radioactive labeling and X-ray fluorescence to confirm that the arsenic was really being used in the biomolecules rather than merely contaminating the cells.

If that could happen in the laboratory, why couldn't it happen naturally? ASU astrobiologist Paul Davies, another one of the paper's co-authors, has long held that "weird life" -- based on chemical building blocks unlike our own -- could exist right under our noses on Earth, or in extraterrestrial environments.

"This organism has dual capability," Davies said in today's announcement. "It can grow with either phosphorus or arsenic. That makes it very peculiar, though it falls short of being some form of truly 'alien' life belonging to a different tree of life with a separate origin. However, GFAJ-1 may be a pointer to even weirder organisms. The holy grail would be a microbe that contained no phosphorus at all."

Davies said GFAJ-1 was "surely the tip of a big iceberg" -- and Wolfe-Simon agreed.

"If something here on Earth can do something so unexpected, what else can life do that we haven't seen yet?" she asked. "Now is the time to find out."

Some bet that it's wrong
Some scientists said they were impressed by the measures that Wolfe-Simon and her colleagues took to verify their findings. "The organization of the experiments presents convincing and exhaustive results," Milva Pepi, an environmental microbiologist at the University of Siena, was quoted as saying in a Science news report.

But Steven Benner, an astrobiologist at the Foundation for Applied Molecular Evolution, told me he was unconvinced. He was invited to Washington today to lay out the skeptical view during a much-hyped news conference at NASA Headquarters. "I'm the guy they bring in to throw the wet blanket over all the enthusiasm," he joked.

He was impressed by the finding that bacteria could get by with so little phosphorus and so much arsenic, but he questioned the conclusion that the arsenic was truly taking the place of phosphorus. Benner explained that chemists have long been familiar with the properties of arsenate compounds. "We know, for example, that they fall apart in water quickly," he said. "Those structures are not going to survive in water."

Felisa Wolfe-Simon takes samples from a sediment core she pulled up from the remote shores of 10 Mile Beach at California's Mono Lake. She uses these samples as starters for cultures to select for microbes that can survive and flourish with high arsenic and no added phosphorus.

In their paper, Wolfe-Simon and her colleagues say that the GFAJ-1 bacteria can apparently cope with that instability, perhaps because of intracellular mechanisms that keep water out. Benner, however, said that other scientists would have to first confirm that the arsenic is really being taken up the way the paper describes, and then figure out how the process squares with what's already known about biochemistry.

"If this result is true, we've got to go back and rewrite a lot of chemistry," Benner said.

Benner is willing to put his money where his mouth is: "I've wagered Felisa $100 that that's not arseno-DNA," he told me. 

That being said, Benner acknowledged that arsenic could conceivably play a role in sustaining truly alien life. "If I'm going to go to Mars, where the temperature is lower, and water is scarcer, and arsenate esters are more stable, this is something I might look for," he observed.

Hype vs. reality
The paper published today could be regarded as the latest chapter in a discussion that's been going on for years among astrobiologists. Wolfe-Simon, Davies and Anbar telegraphed their hypothesis almost two years ago in a paper titled "Did Nature Also Choose Arsenic?" In another paper, Wolfe-Simon speculated that arsenic-based life could exist on Mars or one of the moons of Jupiter or Saturn. And in June, a different group of researchers reported results hinting at the possibility of an alternate biochemistry on Titan, one of Saturn's moons.

So when NASA announced that Wolfe-Simon and other astrobiologists were gathering in Washington today to discuss results that could "impact the search for evidence of extraterrestrial life," speculation ran rampant. Some journalists, including yours truly, could deduce what the news conference was about and read the study in advance -- but only on the condition that nothing referencing the research would be published until Science lifted its embargo. Others figured out that the revelations had to do with arsenic and Mono Lake, even without getting an advance peek at the paper.

Still others took wild guesses about the subject of the news conference. Had NASA detected arsenic on Titan? Was there evidence of extraterrestrial biology at work?

"Some of the coverage has been almost comically erroneous," Ginger Pinholster, director of public programs at the American Association for the Advancement of Science, told Space.com. The AAAS is the publisher of the journal Science, and Pinholster is in charge of the operation that distributes the journal's papers in advance.

Here's a video about the research that was done up by the AAAS:

The whole idea behind the embargo system is that journalists have a chance to digest publications, ask questions and put the research in perspective before they publish their articles. The system isn't perfect -- as NASA and Science found out in August when embargoed research about a bizarre planetary system was outed on Twitter an hour before the scheduled release. And some make the argument that the system is too elitist for the Internet age.

I'm in favor of embargoes -- in part because it helps avoid precisely the kind of hype that was engendered by NASA's public announcement about the news conference. In fact, I'd argue that such announcements should be governed by the same embargo, to head off the cycle of hype and disappointment that some of you may be going through this week. There's also the advantage that you can almost immediately check the original research paper if you so choose.

The scientific search for evidence of life beyond Earth isn't as fast-paced as a science-fiction plotline -- and maybe that part of the story is as important as the news about arsenic in the old lake. But what do you think? Are you disappointed? Intrigued? Bugged by the hype, or bugged by the current system for publishing scientific research? Feel free to chime in with your comments below.

Update for 5:35 p.m. ET: This afternoon's NASA news conference served to lay out the case for (and against) arsenic-based life, and one of the high points came when Wolfe-Simon and Benner sparred over how much arsenic might have been incorporated into the bacteria's biological machinery. Here are other highlights:

  • Wolfe-Simon gave a tour de force explanation of her results, including a jazzy computer-generated video showing arsenic atoms replacing phosphorus atoms in a DNA chain. We're offering the video just above. Give it a click.
  • Benner brought a couple of lengths of heavy chain links to represent molecular chains, as well as a twisted-up ring of aluminum foil to represent the arsenic. The message underlying the props was that arsenic compounds would be too weak to bind molecular chains together for a long time before breaking.
  • Pamela Conrad, a researcher at NASA's Goddard Space Flight Center who specializes in Martian astrobiology, said the Science result was "delightful because it makes me have to expand my notion of what environmental constitutents might enable habitability." If high levels of arsenic as well as organic molecules were found by future Mars probes -- for example, NASA's Curiosity rover, which is due for launch next year -- "you could begin to put a picture together about what the environmental chemistry might portend," Conrad said.
  • The biggest OMG moment came when Mary Voytek, head of NASA's Astrobiology Program, referred to a classic "Star Trek" episode in which the Enterprise crew confronted a seemingly menacing creature called a Horta. "This is, in our mind, the equivalent of finding that Horta, which was silicon-based life, substituting carbon -- which is what we think all life forms are made of -- with silicon. Now we're talking about an organism that we think ... is replacing phosphorus with arsenic," she said. "This is a huge deal."

Fascinating...


Science lifted its embargo on the research paper, "A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus," shortly after noon ET today. The AAAS said the embargo was lifted because "news reports disclosing the findings in the paper are now appearing online."

In addition to Wolfe-Simon, Davies and Anbar, authors include Jodi Switzer Blum, Thomas R. Kulp, Gwyneth W. Gordon, Shelley E. Hoeft, Jennifer Pett-Ridge, John F. Stoltz, Samuel M. Webb, Peter K. Weber and Ronald S. Oremland. The study was funded in part by NASA's Astrobiology Program. Wolfe-Simon, Anbar, Davies and Oremland are members of the NASA Astrobiology Institute "Follow the Elements" team at Arizona State University.

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To "THE BRAIN"

I see your piont and the creative view you show, but i bring a different one. Namely, why humans naturaly wish to "look out there" to those "mirrors" if our insignificant petty species has not settled matters on its own tiny planet. Not to mention exploration could mean the death of us, as perhaps there is a wise and advanced superspieces out there shut up in on its planet, perhaps in a different universe, in fear of destruction at the hands of a greater species. Riddle me that. Pretty good for a middle school student, eh?

To religous people

Simply put, religon is a hastily put together explanatin for what humans did not know thousands of years ago, and is not at home in the world of science. Since the times when scientists were burned at the stake as heretics, religon has hated science and vise-versa, except for a handful of people who believe it can co-exist. I am not speaking of a "revenge of the scientists" this is not "Angels and Demons" i am just stating that with every new scientific discovery, religon loses followers. I know there will be those among you who will wish me to be banished to purgatory, but my beliefs have caused far less death than religon.Case and point, The Crusades. Back to the point, it is my belief that philosophy is the closest anyone should come to religon, and having a deep intrest for it myself, openly take part in the practice.

  • 1 vote
Reply#274 - Fri Dec 3, 2010 2:44 AM EST

what you are trying to do is like trying to tell a man that what he sees and what he lives by since he was a boy is wrong, so there will be some hatred against you most likely. it's not just people of religion, people in general, will be rude if you say something like that, now i'm not saying you believe this but many scientists do, that there are aliens, that man was made by monkeys/fish, and we just appeared out of nowhere, there is no proof, but many things in the bible have been prooven true, it's amazing that people will belive in stuff like that and say that belief of a god is stupid and there is no god but...

certain things happen everyday, what about kids with an incurable sickness, and the next day it's gone, no 'reasonable' explaination for them getting better.

and yes there's the crusades, also the catholic inquisition, murdering non-catholics, the war in the middle east for at least a few hundred years, the holocaust because hitler... wanted one race, dumbass...

communism, for their reason, the huns and mongolians for power, and what about abortion, most religions are are very against it, most abortions are just lack of responsabilty and dont want a baby, very few abortions are to save the mother, 'if you say it's okay for a mother to kill her child whats to stop a brother from killing his brother' mother theresa.

religion is about faith

science is about theorys

you say there is no god, prove it, or prove that your theory is a fact, know this there has been quite a few scientists out to prove god fake, came back a christian, hmm...

but i suppose that it is easier to believe that we just are, then to believe that there is a god.

there are harsh people on both sides, but it can't be helped,

have a good day, doesn't matter who you are, we can co-exist

we learn from the past to correct our mistakes.

    #274.1 - Fri Dec 3, 2010 3:58 PM EST
    Reply

    I love the way the flat earthers explain all this away, with a Pfft and Hurumph. Ten years ago, they would not have even thought to run such experiments. Now, when someone has it's, "nonsense". I find it amusing, thirty years ago, when in College, ALL Dinosaurs, were cold blooded and reptilian. When I put forth the proposition, that some, not all, might not have been reptilian, due to fossil evident of what appeared to be fur or possibly feathers as seen in some Pterodactyl fossils, among others. It was met with great skepticism and raised eyebrows. Now however, it is known that certain classes of "dinosaurs" were in fact proto-mammals. Interesting they way new findings are always met with the same skepticism and raised eyebrows. Yes, the experiments will have to be repeated and expanded, but, why? Why? can the scientific community greet new knowledge with a bit more tact? Funnier still, they demand Empirical proof for some things and only a preponderance of evidence for things they embrace. Darwin's theory is a case in point, "the evidence says",,,, Damn the evidence, show me the "Empirical" Proof. Or the "Big Bang" It all started from a "super Atom" somewhere in space. Okay, then tell me, where did the Atom come from? Had to cone from somewhere. Did the entire universe collapse onto itself then explode, again? Come on, if it takes Empirical proof for somethings, it should be required for all things. If you don't have it, it a theory, nothing more.

      Reply#275 - Fri Dec 3, 2010 2:54 AM EST

      Astrobiologists! That has to be one of the most rarified professions in the world. Strap on your oxygen mask ... or is that your chlorine mask? ..., no, wait, maybe its your fluoride mask. (Oh, shoot, I give up!)

        Reply#276 - Fri Dec 3, 2010 3:16 AM EST

        Isn't anyone a little concerned that aliens might learn how stupid we are? They may pass us bye :o but now it's to late. This comment is not directed at any single person.

          Reply#277 - Fri Dec 3, 2010 4:55 AM EST

          The Bible tells us that God created man out of the dust of the earth, but it doesn't tell us HOW God created anything.  The theory of evolution tells us HOW things came into being and are continually becoming - but it doesn't tell us why.  The 'why' is simple:  the Creator decided to do it that way. And it doesn't make any difference what you want to call the Creator - Chronos (the father of Zeus, the King of the Greek Gods), Allah, God, Ra or something else - He is what He is, and that's beyond our imagination, and He does what He does and has promised that in due time, all will be revealed.  I imagine it amuses Him to watch humans struggling to figure it all out and having hot and heavy 'discussions' - not only about whether He exists and what He's doing, but how He's doing it.

            Reply#278 - Fri Dec 3, 2010 5:46 AM EST

             I much prefer the open minded discussion, where the dialog does not begin with "your ideas will not mesh with my ideas", my personal favorite topic being what would happen to life on earth if gravity was suddenly "turned off."

            I especially like when scientific query presents the problem of life behaving differently than our little box of understanding allows. My next question regarding these arsenophiles would be, what happens to the microbe, whose DNA has been transformed or evolves to the arsenic base variety, if the environment in which it was present suddenly became deplete of arsenic ? Would the individual organisms cease to be, or would the laws that define life on this planet exert influence ?  This question seems to be highly relevant to a person who is suffering from arsenic poisoning or contamination.

              Reply#279 - Fri Dec 3, 2010 7:14 AM EST

              Too bad politics isn't more like science, where your hypotheses are tested in a logical manner and you can see where you were wrong and modify your approach. By using this process, science has advanced, while politics still keeps pulling us into dark ages.

                Reply#280 - Fri Dec 3, 2010 8:11 AM EST

                Spot on and correct tmac. I'm with you buddy!

                The late Carl Sagan is on your side too. As you probably already know - here's what he had to say about it...

                "In science it often happens that scientists say, 'You know that's a really good argument; my position is mistaken,' and then they actually change their minds and you never hear that old view from them again. They really do it. It doesn't happen as often as it should, because scientists are human and change is sometimes painful. But it happens every day. I cannot recall the last time something like that happened in politics or religion. [Carl Sagan, 1987 CSICOP keynote address]"

                  #280.1 - Fri Dec 3, 2010 12:00 PM EST
                  Reply

                  Is'nt this assuming that Alien life will have a double helix...............etc.

                    Reply#281 - Fri Dec 3, 2010 9:32 AM EST

                    Should I miss the love me or die commitment of life as we knew it for phosphorus, hydrogen, nitrogen, carbon, oxygen and sulfur? I might be conflicted about the resiliency and potential vulnerability of life as I ponder any of my core constituencies being swapped out for perhaps lesser ones, or the constituencies of my food sources, or their food sources. Seems that risk was always there but there is now greater weight I think in safeguarding our environment. Mother nature can correct by adaptation for single life forms in unexplored ways while offering no assurances of sustaining any one particular life form farther up the food chain - like humans.

                    I choose to hope that new research and testing following up on this finding leads to better medicine, product safety and environmental impact understandings. And fiction writers are a little less constrained by having to make their musings adhere to known scientific fact - even if it has been more interesting to me when they do.

                      Reply#282 - Fri Dec 3, 2010 10:43 AM EST

                      Since the observed phenomena of the universe shows us that each nova & supernovae are different, different balances and weights of elements, we must assume that there are an infinite number of variables from which life could arise. This experiment simply shows how easy it is to manipulate the complexity of life as we know it. Therefore, I would conclude that life does exist elsewhere in this huge space we call our universe, otherwise it would be an aweful waste of space. I just hope friendly life is what we encounter first, because we sure do need some help! Only 748 days left, presumably....

                        Reply#283 - Fri Dec 3, 2010 11:16 AM EST

                        Thanks so much to all who have provided thoughtful contributions in this discussion group. I would only add that it is very significant in that plugging this new info into Drake's Equation (http://www.pbs.org/wgbh/nova/origins/drake.html) now indicates that other life in the universe is even more likely than it was before this finding was announced. Specifically, I am referring to the third variable in Drake's Equation; the average number of planets per star that could support life.

                        I am sure that other thinking people in this discussion have noticed that slowly but surely new scientific findings through the years always seem to bring us closer to the inevitable conclusion that the universe is humming with life! I suspect that this trend will continue. At the risk of adding my "opinion" to this factual discussion - detecting life out there is simply a matter of time with the help of advancing technology.

                        P.S. I guess the Star Trek episode that featured silicon based lifeforms doesn't seem so exotic after all? Remember the Bones quote, "I'm a doctor, not a bricklayer."

                          Reply#284 - Fri Dec 3, 2010 11:51 AM EST

                          That was a great Star Trek episode. Ya know, if you really think about the vastness of the universe - Absolutely ANYTHING is possible until it has been PROVEN impossible !

                            #284.1 - Fri Dec 3, 2010 12:08 PM EST

                            You're so right Stevesteve, and we must be careful in how we determine when something has really been proven to be impossible.

                            Would anyone have believed 50 years ago that there were worms in the deepest parts of earth's ocean that used thermal energy, rather than the sun, to provide for it's needs? I only wish I could live to see what jaw dropping discoveries await us in the future decades and centuries!

                            These strange developments make me want to try writing some science fiction. It seems that the outrageous has just become possible.

                              #284.2 - Fri Dec 3, 2010 1:52 PM EST

                              I've seen fungus growing inside a jet fuel storage tank. Life can adapt to many things.

                                #284.3 - Sat Dec 4, 2010 9:41 PM EST
                                Reply

                                lets start a petition to push NASA to put some recources into trying to find INTELLIGENT life on wall street !

                                  Reply#285 - Fri Dec 3, 2010 12:05 PM EST

                                  ....i wonder how many people know that the earliest scientists were devout believers in a god?

                                  isaac newton was a believer in a god and is said by many to be the sharpest intellect to have ever lived.......

                                    Reply#286 - Fri Dec 3, 2010 2:38 PM EST

                                    I wonder why you feel you can speak for any of the "earliest scientist"? Do you talk to them like you talk to your god?

                                      #286.1 - Fri Dec 3, 2010 3:14 PM EST
                                      Reply

                                      Horta is the Greek term for a dish of steamed vegetables. A perfect analogy for bacteria eating arsenic, since Horta is delicious!

                                        Reply#287 - Fri Dec 3, 2010 10:48 PM EST

                                         Well it seems that many want to discuss GOD and not what has been claimed to have been discovered! They say life can adapt to arsenic which kills most life! Why not use this starting point to make micro organisms capable of eating or reducing heavy metals including mercury contaminated areas which humans ( called the higher level of life) have created! This is surly a science discussion NOT about the rights and differences about GOD?

                                          Reply#288 - Sat Dec 4, 2010 5:46 AM EST

                                          Well it seems that many want to discuss GOD and not what has been the main point! They say life can adapt to arsenic which kills most life. Why not use this starting point to make micro organism capable of eating or reducing heavy metals or mercury contaminated areas which humans (called the higher level of life) have created? This is surly a science discussion NOT about a GOD!

                                            Reply#289 - Sat Dec 4, 2010 5:48 AM EST

                                            Off topic but I have been reading about "embargo's" and "embargo violations" in other news topics. This whole embargo thing bugs me a lot. Seems like a really creepy way to control the flow of information and gives handouts to select media sources while denying others. The misconception by the portion of the blogosphere not in the loop that NASA discovered ET is a perfect example. Is it un-ethical for amateur journalists to spread the word on what they perceive as news or to create an unfair system that spreads disinformation to online news consumers?

                                              #289.1 - Sat Dec 4, 2010 9:36 AM EST
                                              Reply
                                              jingjingdeDeleted


                                              "...is as important as the news about arsenic in the old lake."

                                              "Arsenic in the old lake"...ha, ha! That's a rather clever allusion, Mr. Boyle.

                                                Reply#291 - Wed Dec 8, 2010 7:01 PM EST
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